drug-protein-ligand-md

drug-protein-ligand-md is a Chemistry & materials skill for AI agents, published by learningmatter-mit in the AtomisticSkills repository on GitHub. Skillspace rates drug-protein-ligand-md C (77/100) and it passed the safety scan; the rating is based on static analysis only.

Run a protein-ligand MD simulation in OpenMM with energy minimization, restrained equilibration, and production NPT, producing trajectory and checkpoint files for downstream analysis.

Grade
C
Quality
77 / 100
Safety
Passed
GitHub stars
132

Unproven: rated by static analysis only, not yet compared head-to-head.

This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.

Our review

Architecture
94 / 100
Maturity
Structured: ships references or scripts
Security scan
No issues found
License
MIT
Adoption
Adopted by 0 other repositories, in 0 collections

Not checked yet

  • Not judged on the rubric yet (not a contender in its category)
  • No blind task eval yet
  • Scope (portable / vendor / repo-internal) not assessed; only the top of each category is read for scope
  • Sibling files (scripts, references) not fetched; security scan covers SKILL.md only

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