dynamo-conventional-rna-velocity
dynamo-conventional-rna-velocity is a Bioinformatics & life sciences skill for AI agents, published by aristoteleo in the dynamo-release repository on GitHub. Skillspace rates dynamo-conventional-rna-velocity C (74/100) and it passed the safety scan; the rating is based on static analysis only.
Run or adapt a conventional spliced/unspliced RNA velocity workflow in `dynamo`, including `Preprocessor` preprocessing, `dynamics`, low-dimensional `cell_velocities`, `VectorField`, topology / potential analysis, confidence-based correction, fate prediction, and optional animation. Use when analyzing conventional scRNA-seq `AnnData`, reproducing or adapting tutorial notebooks such as `200_zebrafish.ipynb`, or selecting between preprocessing, kinetics, vector-field, and fate stages for a reusable velocity pipeline.
- Grade
- C
- Quality
- 74 / 100
- Safety
- Passed
- GitHub stars
- 504
Unproven: rated by static analysis only, not yet compared head-to-head.
This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.
Our review
- Architecture
- 100 / 100
- Maturity
- Structured: ships references or scripts
- Security scan
- No issues found
- License
- BSD-3-Clause
- Adoption
- Adopted by 0 other repositories, in 0 collections
Not checked yet
- Not judged on the rubric yet (not a contender in its category)
- No blind task eval yet
- Scope (portable / vendor / repo-internal) not assessed; only the top of each category is read for scope
- Sibling files (scripts, references) not fetched; security scan covers SKILL.md only
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