fba-simulator

fba-simulator is a Bioinformatics & life sciences skill for AI agents, published by aiming-lab in the AutoResearchClaw repository on GitHub. Skillspace rates fba-simulator D (59/100) and it passed the safety scan; the rating is based on static analysis only.

Run Flux Balance Analysis (FBA) and related constraint-based simulations using COBRApy. Covers standard FBA, parsimonious FBA (pFBA), Flux Variability Analysis (FVA), loopless FBA, gene/reaction knockouts, and carbon source swapping. Outputs flux distributions and CSV files.

Grade
D
Quality
59 / 100
Safety
Passed
GitHub stars
13,814

Unproven: rated by static analysis only, not yet compared head-to-head.

This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.

View source on GitHubaiming-lab/AutoResearchClaw

Our review

Architecture
84 / 100
Maturity
Basic: a single SKILL.md
Security scan
No issues found
License
MIT
Adoption
Adopted by 1 other repositories, in 1 collections
Scope
Vendor-specific: built around one product. Runs constraint-based simulations with the public COBRApy library

Not checked yet

  • Not judged on the rubric yet (not a contender in its category)
  • No blind task eval yet
  • Sibling files (scripts, references) not fetched; security scan covers SKILL.md only

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