knowledge-graph-tools

knowledge-graph-tools is a Bioinformatics & life sciences skill for AI agents, published by DrugClaw in the DrugClaw repository on GitHub. Skillspace rates knowledge-graph-tools C (74/100) and it passed the safety scan; the rating is based on static analysis only.

Drug-discovery knowledge-graph workflow guide for assembling drug-target-disease-pathway relationship graphs from OpenTargets GraphQL, ChEMBL REST, STRING PPI, and Reactome pathway APIs, then running hub detection, shortest-path queries, and neighborhood expansion with networkx. Use when the user asks to build, query, or visualize a biomedical knowledge graph connecting drugs, targets, diseases, and pathways from real public databases without making clinical claims.

Grade
C
Quality
74 / 100
Safety
Passed
GitHub stars
126

Unproven: rated by static analysis only, not yet compared head-to-head.

This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.

View source on GitHubDrugClaw/DrugClaw

Our review

Architecture
100 / 100
Maturity
Structured: ships references or scripts
Security scan
No issues found
License
Apache-2.0
Adoption
Adopted by 0 other repositories, in 0 collections

Not checked yet

  • Not judged on the rubric yet (not a contender in its category)
  • No blind task eval yet
  • Scope (portable / vendor / repo-internal) not assessed; only the top of each category is read for scope
  • Sibling files (scripts, references) not fetched; security scan covers SKILL.md only

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