liftover-coordinates

liftover-coordinates is a Bioinformatics & life sciences skill for AI agents, published by ammawla in the encode-toolkit repository on GitHub. Skillspace rates liftover-coordinates D (69/100) and it passed the safety scan; the rating is based on static analysis only.

Convert genomic coordinates between assembly versions (GRCh37/hg19 to GRCh38/hg38, mm9 to mm10). Guides UCSC liftOver for BED files, CrossMap for VCF/bigWig, and handles unmapped regions with provenance logging.

Grade
D
Quality
69 / 100
Safety
Passed
GitHub stars
37

Unproven: rated by static analysis only, not yet compared head-to-head.

This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.

View source on GitHubammawla/encode-toolkit

Our review

Architecture
91 / 100
Maturity
Structured: ships references or scripts
Security scan
No issues found
License
AGPL-3.0
Adoption
Adopted by 0 other repositories, in 1 collections

Not checked yet

  • Not judged on the rubric yet (not a contender in its category)
  • No blind task eval yet
  • Scope (portable / vendor / repo-internal) not assessed; only the top of each category is read for scope
  • Sibling files (scripts, references) not fetched; security scan covers SKILL.md only

Better-rated skills in Bioinformatics & life sciences

Skillspace indexes and rates this skill; it does not host or endorse it. Run third-party skills at your own risk.