sc-pseudotime

sc-pseudotime is a Bioinformatics & life sciences skill for AI agents, published by TianGzlab in the OmicsClaw repository on GitHub. Skillspace rates sc-pseudotime A (94/100) and it passed the safety scan; the rating is based on static analysis only.

Load when ordering cells along a developmental trajectory in a normalised scRNA AnnData via DPT, Palantir, VIA, CellRank, Slingshot (R), or Monocle3 (R). Skip when ranking marker genes per cluster (use sc-markers) or for RNA velocity vector fields (use sc-velocity).

Grade
A
Quality
94 / 100
Safety
Passed
GitHub stars
152

Unproven: rated by static analysis only, not yet compared head-to-head.

This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.

View source on GitHubTianGzlab/OmicsClaw

Our review

Architecture
100 / 100
Maturity
Packaged: licensed, with a version or references
Security scan
No issues found
License
Apache-2.0
Adoption
Adopted by 0 other repositories, in 1 collections

Not checked yet

  • Not judged on the rubric yet (not a contender in its category)
  • No blind task eval yet
  • Scope (portable / vendor / repo-internal) not assessed; only the top of each category is read for scope
  • Sibling files (scripts, references) not fetched; security scan covers SKILL.md only

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