scrna-preprocessing-clustering
scrna-preprocessing-clustering is a Bioinformatics & life sciences skill for AI agents, published by Runchuan-BU in the BioClaw repository on GitHub. Skillspace rates scrna-preprocessing-clustering C (71/100) and it passed the safety scan; the rating is based on static analysis only.
Standard scRNA-seq preprocessing and clustering with Scanpy. Use for QC, normalization, HVG selection, PCA, neighbor graph construction, UMAP, Leiden clustering, and export of an analysis-ready AnnData object.
- Grade
- C
- Quality
- 71 / 100
- Safety
- Passed
- GitHub stars
- 397
Unproven: rated by static analysis only, not yet compared head-to-head.
This rating describes the version of the repository we crawled; it may have changed since, so go by its current files.
Our review
- Architecture
- 94 / 100
- Maturity
- Structured: ships references or scripts
- Security scan
- No issues found
- License
- Not declared. Check the repository before reusing it.
- Adoption
- Adopted by 1 other repositories, in 3 collections
Not checked yet
- Not judged on the rubric yet (not a contender in its category)
- No blind task eval yet
- Scope (portable / vendor / repo-internal) not assessed; only the top of each category is read for scope
- Sibling files (scripts, references) not fetched; security scan covers SKILL.md only
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